An entity can be a specific physical entity (gene or drug), it can be a class of an entity (Kinase receptor) or any other term in our VOCabs (including biomedical verbs).
We have curated a specific vocabulary of scientific verbs for TExpress, these can also be augmented/edited or replace with your own collected as required.
Documents are first passed through TERMite which identifies the individual entities in the text. Once marked up, they are then passed to TExpress to match semantic patterns defined in the search as in the example below.
The patterns can be as broad or narrow as needed depending on the specificity of the entities used.
Outputs can be delivered in multiple formats including JSON, XML, HTML and TSV.
Get in touch with us to find out how we can transform your data.
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